Bioinformatikerin
- Verfügbarkeit einsehen
- 0 Referenzen
- 1€/Stunde
- 80938 München
- Nähe des Wohnortes
- de | en
- 11.09.2024
Kurzvorstellung
Qualifikationen
Projekt‐ & Berufserfahrung
10/2023 – 2/2024
Tätigkeitsbeschreibung
Marker Development Based on Transcriptome Data
The project focused on developing genetic markers based on transcriptome data of an endangered species, using NGS data from two samples. Using Bash scripting, I conducted quality control with FASTQC, adapter trimming and contaminant removal with BBDuk, de novo assembly with SPAdes and MegaHit, and variant calling with FreeBayes. I further identified mutations and genes through BCFtools and BLAST to obtain high-confidence markers for genetic diversity assessment.
Bash (Shell), R (Programmiersprache)
3/2023 – 9/2023
TätigkeitsbeschreibungIn my Thesis, I worked extensively with metabolomics data derived from FT-ICR-MS. I used a range of bioinformatics tools including PCA, HCA, and OPLS-DA for statistical analysis and pattern recognition in the dataset. Data processing involved assigning molecular formulas and conducting network analyses to visualize relationships between metabolites. My experience with chemometrics and bioinformatics software enabled me to handle large datasets efficiently and derive meaningful biological insights from complex metabolomic profiles.
Eingesetzte QualifikationenR (Programmiersprache)
Ausbildung
HM
München
Über mich
• MS Metabolomics Data
• qPCR Data
• NGS Data
• Ecological Data from Field Studies
• Protein Docking Simulations using YASARA and PyMOL
Persönliche Daten
- Deutsch (Muttersprache)
- Englisch (Fließend)
- Europäische Union
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